BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB033E07LP1|AL429755
(865 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1170 1688 0.0
>3x_Contig1170
Length = 4668
Score = 1688 bits (851), Expect = 0.0
Identities = 861/865 (99%)
Strand = Plus / Minus
Query: 1 gatccacaaatagttctttgaatatcttttttagagaaggattcgtcaattgatataacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3828 gatccacaaatagttctttgaatatcttttttagagaaggattcgtcaattgatataacg 3769
Query: 61 aacggatgatgcaggctggaaaaatagaaaacagagaactcaaatagtaatctttaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3768 aacggatgatgcaggctggaaaaatagaaaacagagaactcaaatagtaatctttaattt 3709
Query: 121 gattttttttgaggaataaaggtgcaaagggtattgatgttattcaaaaaagaagaggat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3708 gattttttttgaggaataaaggtgcaaagggtattgatgttattcaaaaaagaagaggat 3649
Query: 181 agaaataaagcgagtgaatgaaatggggggaaggggtatatcttttctctctttttaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3648 agaaataaagcgagtgaatgaaatggggggaaggggtatatcttttctctctttttaacc 3589
Query: 241 ataaaatgggataaaaactgtgagatgcgttgggaaaaaaaaaattgatctgtttctaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3588 ataaaatgggataaaaactgtgagatgcgttgggaaaaaaaaaattgatctgtttctaca 3529
Query: 301 ctgtagatctagtagaagacgaagttagcagtaccagaagtgacagamacggtacaaccg 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3528 ctgtagatctagtagaagacgaagttagcagtaccagaagtgacagaaacggtacaaccg 3469
Query: 361 tcagagccactaccagtgtaactaccatcgatgtaagaacaagcaccgttcacagaagcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3468 tcagagccactaccagtgtaactaccatcgatgtaagaacaagcaccgttcacagaagcg 3409
Query: 421 ccgtcagcagcctcaatcttaatggagtagtttggagcctcgttgttgtttgggttagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3408 ccgtcagcagcctcaatcttaatggagtagtttggagcctcgttgttgtttgggttagga 3349
Query: 481 atgatggacaggtaagtgataccattgacgtaaccagcacccaagacaactggggcccag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3348 atgatggacaggtaagtgataccattgacgtaaccagcacccaagacaactggggcccag 3289
Query: 541 ttaccgacaccagaaccgtcagtaccccagatacaaccgtcttcaacagaaacaccggcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3288 ttaccgacaccagaaccgtcagtaccccagatacaaccgtcttcaacagaaacaccggcg 3229
Query: 601 ttgttgacgtatatttgagaagaggtggatttaccttgccatttgtagtaagaatcttcg 660
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3228 ttgttgacgtagtattgagaagaggtggatttaccttgccatttgtagtaagaatcttcg 3169
Query: 661 tcaacgacggagattggcttcttagagtttggttggaccaaagttggaacaaccatattt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3168 tcaacgacggagattggcttcttagagtttggttggaccaaagttggaacaaccatattt 3109
Query: 721 tcagaacccgggtagtcagttctacacaaggagatagcagagtccttgttgttaacggcg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3108 tcagaacccgggtagtcagttctacacaaggagatagcagagtccttgttgttaacggcg 3049
Query: 781 taagaggattgacgaccccattcacacaagtatttggaatcttggttcgtacggtataag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3048 taagaggattgacgaccccattcacacaagtatttggaatcttggttcgtacggtataag 2989
Query: 841 taaccgttcttacatagcaaaccac 865
|||||||||||||||||||||||||
Sbjct: 2988 taaccgttcttacatagcaaaccac 2964
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8050
Number of Sequences: 1807
Number of extensions: 8050
Number of successful extensions: 57
Number of sequences better than 1.0e-20: 1
length of query: 865
length of database: 10,358,551
effective HSP length: 16
effective length of query: 849
effective length of database: 10,329,639
effective search space: 8769863511
effective search space used: 8769863511
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)